Table 1a
Strand Name of TFBS Total # of promoters in which TFBS is found % of promoters in which TFBS is found Total # of TFBSs found Over-representation index (ORI)
-1 GEN_INI" 1397 78,88 7191 0,5247
+1 Spz1" 1353 76,4 4279 6,1791
+1 GEN_INI" 1351 76,28 6412 0,4898
+1 E2F-1" 1315 74,25 3370 20,205
+1 ZF5" 1253 70,75 3864 32,1645
-1 E2F-1" 1237 69,85 2698 17,4793
-1 ZF5" 1193 67,36 3533 27,4143
+1 C/EBP" 1138 64,26 2344 0,3167
-1 Spz1" 1098 62 2966 3,6005
-1 cap" 1098 62 1846 0,5212
+1 cap" 1097 61,94 1759 0,4962
-1 Pax-4" 1037 58,55 1696 0,3662
-1 AP-2" 1036 58,5 2082 13,9303
+1 E2F" 1019 57,54 2184 84,3371
+1 Sp1" 1016 57,37 2803 9,1833
+1 STAT1" 998 56,35 1601 0,7804
+1 AP-2" 981 55,39 1945 13,0998
-1 C/EBP" 970 54,77 1950 0,2602
-1 E2F" 927 52,34 1837 66,4509
-1 STAT1" 901 50,88 1347 0,7086
+1 STAT5A" 901 50,88 1452 0,518
+1 AP-2rep" 890 50,25 1234 1,4248
+1 STAT3" 872 49,24 1278 1,8055
+1 Pax-4" 864 48,79 1297 0,2881
-1 Pax-2" 862 48,67 1251 0,3972
-1 Sp1" 852 48,11 2103 5,762
+1 AP-2gamma" 848 47,88 1221 11,628
-1 HOXA3" 848 47,88 1147 0,3824
-1 STAT3" 843 47,6 1259 1,7946
-1 STAT5A" 843 47,6 1282 0,5124
-1 AP-2alpha" 832 46,98 1218 16,7935
-1 AP-2gamma" 828 46,75 1160 11,2741
+1 Zic3" 825 46,58 1244 3,1516
+1 GKLF" 821 46,36 1911 1,315
+1 Zic1" 804 45,4 1190 2,941
+1 HOXA3" 800 45,17 1071 0,3279
+1 AP-2alpha" 796 44,95 1162 15,7043
+1 Pax-8" 774 43,7 1354 0,6277
+1 Pax-2" 753 42,52 1045 0,379
-1 GKLF" 749 42,29 1798 0,9422
+1 CdxA" 739 41,73 1426 0,1227
-1 CdxA" 730 41,22 1413 0,1416
+1 p53 decamer" 715 40,37 924 1,0595
+1 Msx-1" 710 40,09 947 0,3157
-1 p53 decamer" 696 39,3 905 0,9093
+1 ETF" 671 37,89 1250 42,2698
-1 Zic3" 661 37,32 942 2,1969
+1 GC box" 660 37,27 1133 15,0562
-1 TTF-1" 655 36,98 824 0,492
-1 Pax-8" 636 35,91 1028 0,4662
-1 SRY" 634 35,8 907 0,2222
+1 GATA-1" 628 35,46 843 0,9162
-1 AP-2rep" 621 35,06 769 0,7606
-1 Zic1" 603 34,05 810 1,9324
+1 TTF-1" 596 33,65 740 0,5165
+1 STAT4" 583 32,92 717 0,578
+1 En-1" 576 32,52 751 0,3433
+1 MZF1" 565 31,9 917 2,3014
+1 VDR" 550 31,06 950 3,7192
-1 Msx-1" 546 30,83 703 0,2409
-1 GATA-1" 541 30,55 654 0,713
-1 GC box" 539 30,43 842 9,9
-1 SMAD" 533 30,1 639 0,891
-1 MZF1" 525 29,64 841 2,1116
-1 ETF" 493 27,84 832 20,2316
+1 USF" 470 26,54 1074 0,7262
+1 STAT6" 469 26,48 559 1,1922
-1 c-Myb" 469 26,48 543 0,9892
-1 USF" 464 26,2 1019 0,6842
+1 p300" 459 25,92 562 1,7481
+1 EGR" 457 25,8 678 16,9387
+1 SMAD" 455 25,69 541 0,7473
-1 STAT4" 445 25,13 532 0,3946
-1 NF-1" 443 25,01 513 1,1948
-1 STAT6" 441 24,9 539 1,2584
-1 YY1" 435 24,56 811 0,3945
-1 AP-4" 434 24,51 796 5,0962
-1 VDR" 429 24,22 695 2,1717
-1 Muscle initiator" 423 23,88 510 8,8984
+1 AP-4" 405 22,87 716 4,5951
+1 NF-1" 403 22,76 463 1,1202
+1 SRY" 398 22,47 550 0,1449
+1 GATA-3" 394 22,25 498 0,3286
-1 Elk-1" 393 22,19 579 34,0581
-1 c-Ets-1(p54)" 385 21,74 680 5,3438
+1 c-Ets-1(p54)" 381 21,51 660 6,3377
+1 Elk-1" 376 21,23 553 40,1891
+1 YY1" 376 21,23 620 0,2506
-1 En-1" 359 20,27 430 0,1733
+1 Ncx" 358 20,21 408 0,2555
+1 c-Myb" 350 19,76 387 0,7221
-1 FAC1" 350 19,76 522 0,0882
+1 LF-A1" 346 19,54 389 2,3325
+1 C/EBPalpha" 345 19,48 400 0,1677
-1 EGR" 323 18,24 490 9,2516
+1 GATA-2" 321 18,13 375 0,539
-1 DBP" 313 17,67 346 0,5028
-1 C/EBPalpha" 313 17,67 364 0,1427
+1 AP-1" 307 17,33 636 0,7741
-1 c-Myc/Max" 305 17,22 376 13,2524
-1 LBP-1" 299 16,88 335 20,3961
+1 Muscle initiator" 295 16,66 333 5,383
+1 Zic2" 289 16,32 332 1,553
-1 AP-1" 289 16,32 589 0,6468
-1 Ncx" 288 16,26 321 0,167
+1 TFII-I" 287 16,21 356 2,4348
-1 p300" 285 16,09 315 0,8187
+1 c-Myc/Max" 283 15,98 359 13,1931
-1 GATA-3" 282 15,92 341 0,1756
+1 LBP-1" 271 15,3 293 16,4425
+1 MAZ" 271 15,3 353 15,7989
-1 LF-A1" 268 15,13 286 1,5617
-1 CREB" 251 14,17 405 46,2131
+1 PU.1" 247 13,95 276 4,4827
+1 ETS" 244 13,78 268 1,9155
-1 Oct-1" 240 13,55 336 0,0387
+1 Ik-2" 239 13,5 254 0,4506
+1 Oct-1" 238 13,44 342 0,0446
-1 Ik-2" 236 13,33 253 0,536
+1 CREB" 234 13,21 392 43,6498
+1 DBP" 234 13,21 263 0,4105
-1 MAZ" 232 13,1 309 13,7161
-1 GATA-2" 229 12,93 256 0,2734
-1 TFII-I" 228 12,87 270 1,3658
+1 USF2" 227 12,82 238 1,7731
-1 Direct repeat 1" 224 12,65 247 0,8722
-1 HSF1" 224 12,65 235 0,7958
+1 Direct repeat 1" 221 12,48 243 1,0278
-1 PU.1" 220 12,42 239 3,3923
+1 FAC1" 219 12,37 329 0,0685
+1 FOXM1" 217 12,25 246 0,1577
-1 ETS" 216 12,2 240 1,7678
+1 TATA" 206 11,63 269 0,9758
+1 GR" 206 11,63 215 0,4421
+1 MYB" 204 11,52 216 1,9997
-1 HNF-4" 204 11,52 219 0,8368
+1 Lyf-1" 203 11,46 223 0,4408
-1 Pax" 202 11,41 213 1,0547
+1 Pax-3" 200 11,29 222 7,91
-1 USF2" 194 10,95 208 1,6183
-1 TEF-1" 189 10,67 202 0,4407
-1 Pax-3" 187 10,56 206 6,4668
-1 ELF-1" 187 10,56 203 1,348
+1 CAC-binding protein" 184 10,39 207 4,5417
+1 HSF1" 182 10,28 194 0,5964
+1 GATA-6" 182 10,28 188 0,1101