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Poster - Abstracts  (by surname of first author)


P. Arrigo, P. Scartezzini, A. Egeo and P. P. Cardo AGeWa (Automatic Gene Walk) : an automatic tool for ASO design
C. Bannert, M. Rehmsmeier, R. Spang and J. Stoye Sequence Database Search Using Jumping Alignments
A. Barbasiewicz, L. Liu, B. F. Lang, N. Shimko and G. Burger Building Organelle Genome Databases using an Object-Oriented Approach
K. Behrendt, A. Politzer, J. Saez-Rodriguez, M. Reuss and K. Mauch Topological Analysis and Visualisation of large Signalling Networks: The TGF-beta Signal Transduction in Eukaryotic Systems
U. Bohnebeck and T. Wetjen Effective Pre- and Post-Processing for the Determination of Highly Sensitive Oligonucleotides to be Used on DNA Microarrays
R. Braeuning, P. Ernst, M. Falkenhahn, K.-H. Glatting, A. Hotz-Wagenblatt, M. van der Linden, B. Pardon, C. del Val and S. Suhai The German EMBnet Node: GENIUSnet
M. Brandl, M. S. Weiss, A. Jabs, J. Sühnel and R. Hilgenfeld C-H... Interactions in Proteins: A Structural Bioinformatics Study
A. Fleischmann, M. Darsow, K. Degtyarenko and R. Apweiler IntEnz - The Enzyme Database in Oracle
E. Fricke, S. Land, S. Rotert, D. Karas and E. Wingender Cytomer: A database on gene expression sources
R. R. Gabdoulline, A. Gonzalez and R. C. Wade 3D modeling of macromolecular structures and reactions in the context of genomes
V. Gailus-Durner, R. Gohla and T. Crass A Question Based Navigator for Exercising Distributed Bioinformatics Tasks
Ä. Glass, L. Gierl Designing GENESYS - a software system for mining chip data
U. Goebel, S. Gebauer-Jung and T. Wiehe A Program for the Construction of a Promoter Model From a Set of Upstream Sequences of Coregulated Genes
E. Goessling, O. V. Kel-Margoulis, A. E. Kel and E. Wingender MATCHTM - a tool for searching transcription factor binding sites in DNA sequences. Application for the analysis of human chromosomes
S. Goetze, A. Knopp, C. Benham, S. A. Krawetz and J. Bode Biomathematical and in vitro analysis of destabilized regions in the interferon gene cluster
U. Götze, S. Pistor, C. Choi, M. Krull, F. Schacherer, N. Voss and E. Wingender TRANSPATH - a database on signal transduction networks
Juergen Haas Flexible Web-Controlled Pipelining of Stand-Alone Windows Data Analysis Applications
K. Hafez and J.-G. Reich Modeling the Human Lipoprotein Metabolism using the Object Oriented Approach - Role of CETP
J.-T. Horng, C.-M. Lin, B.-H. Yang and C.-Y. Kao A Genetic Algorithm for Multiple Sequence Alignment
H.-D. Huang, S.-F. Fang and J.-T. Horng Mining Combinations of Structural Motif from SSU 16 S Ribosomal RNA Secondary Structures
J. Hüsing, M. Zeschnigk, T. Hölter and K.-H. Jöckel Using expression arrays to investigate deletion of chromosomal strands
H.-C. Hung, G.-Y. Liu, and G.-G. Chang Computer Data Fitting in the Equilibrium Protein Folding Process Involving Multiple Intermediates
J. Hurlebaus, W. Wiechert and R. Takors MMT - A Metabolic Modeling Tool for Metabolic Engineering
D. Husmeier and F. Wright Approximate Bayesian Discrimination between Alternative DNA Mosaic Structures
O. V. Kel-Margoulis, I. V. Deineko, I. Reuter, E. Wingender and A. E. Kel TRANSCompel® - a professional database on composite regulatory elements in eukaryotic genes
N. Khan and S. Rahman A Conceptual Object Model of Gene Mutation Data
J. T. Kim Modelling the Organization of Flower Morphogenesis by Transcription Factor Networks Using Lindenmayer Systems
J. T. Kim, T. Martinetz and D. Polani On the Effects of Transcription Factor Properties on the Information Content of Binding Sites
S. Klamt and E. D Gilles FluxAnalyzer: A Graphical User Interface for Analyzing Structural Properties and Fluxes in Balanced Metabolic Networks
D.-U. Kloos, C. Choi and E. Wingender The SMAD-TGF-ß Signalling Network: TRANSFAC meets TRANSPATH
A. Knopp, S. Goetze, C. Benham, M. Frisch, S. Krawetz and J. Bode Analysis of biomathematically predicted Scaffold / Matrix Attached Regions (S/MARs) by three different approaches
K. Koch, F. Zöllner and G. Sagerer Building a new Rotamer Library for Protein-Protein Docking using energy calculations and statistical approaches
M. Lange, A. Freier, U. Scholz and A. Stephanik A Computational Support for the Access to Integrated Molecular Biology Data
W. Liebermeister Independent component analysis of gene expression data
I. Liebich, M. Christensen and E. Wingender ReAlSplice: A database on regulated alternative splicing
W. Liu, A. Woodward and D. Kell Compression of proteome gel images using complex wavelet transform
H. Michael, S. Thiele and E. Wingender TRANSFAC®_YEAST
S. Möller, M. Bantscheff, M. O. Glocker, D. Koczan, P. Lorenz and H.-J. Thiesen Correlation of Gene Expression as Measured by Different Assays
F. Moldenhauer, I. Zevedei and S. Schuster Pathway Analysis of Metabolic Networks: New version of METATOOL and convenient classification of metabolites
A. Mueller and M. J .E. Sternberg Structural annotation of the human genome
Y. L. Orlov, V. P. Filippov, V. N. Potapov and N. A. Kolchanov Construction of stochastic context trees for genetical texts
Y. L. Orlov, E. E. Vityaev, O. V. Vishnevsky, A. S. Belenok, B. K. Kovalerchuk, M. A. Pozdnyakov and N. A. Kolchanov Program "Gene Discovery" for Pattern Matching in Promoter Sequences
J. Pleiss, C. Gentner, H. Scheib, T. Schulz and R. D. Schmid From sequence to function: a quantitative model of lipase enantioselectivity
A. Potapov, K. Seidel, M. Christensen, V. Drewes, F. Schacherer and E. Wingender The integrated TRANSFAC system as a basis for modeling the architecture of gene regulatory networks
J. Reichert, K. Mehliss and J. Sühnel The IMB Jena Image Library of Biological Macromolecules - New Features
K. Runte, H. Hermjakob and R. Apweiler Towards a New Curation Environment for the TrEMBL Database
C. Schneider, M. Brandl, M. Meyer and J. Sühnel Water-Mediated Uracil-Cytosine Base Pairs in RNA - A Computational Study
D. Schomburg, I. Schomburg, A. Chang, O. Hofmann, C. Ebeling and F. Ehrentreich BRENDA a resource for Enzyme data and metabolic pathway information
M. Schwehm Fast Stochastic Simulation of Metabolic Networks
K. Seidl and E. Wingender - PheGe - a novel concept for in-silico analyses of genotype/phenotype relations
J. Sun, J. van den Heuvel, A.-P. Zeng Reconstruction of metabolic and regulatory networks of Klebsiella pneumoniae from genome data
T. Toepel, U. Scholz, U. Mischke, D. Scheible, R. Hofestaedt and F. Trefz RAMEDIS - Rare Metabolic Diseases Publishing Tool for Genotype-Phenotype Correlation
A. T. Vasconcelos, L. Gonzaga, R. C. de Souza, D. Q. Mendes, R. F. C. Paixão, R. Kersanach, M. Oliveira, S. M. Martins and A. J. G. Simpson A Tool for Automatic Genome Annotation
M. Werber and B. Weisshaar TF-Workbench: a database-driven environment for the analysis of transcription factors
K. Wieligmann, L.F. Pineda De Castro and M. Zacharias Conformational preferences of SH2 domains in free and ligand-bound states studied by molecular dynamics simulations
L. U. Wingen, J. T. Kim, H. Saedler and K. Dekker ZIGIA-DB: A versatile database for handling complex functional genomic data of Arabidopsis thaliana
E. W. Wolski, C. Wierling, T. Kreitler, S. Kielbasa, U. Schneider, J. Gobom, H. Lehrach and H. Eickhoff Visualization and analysis of gene expression data using freeware and GPL-Software
L. C. Wu, J. - T. Horng and F.- M. Lin An Approach to Finding Short Tandem Repeats in Complete Genomes
I. Zevedei-Oancea and S. Schuster Treatment of multifunctional enzymes in metabolic pathway analysis