
Poster - Abstracts (by surname of first author)
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P. Arrigo, P. Scartezzini, A. Egeo and P. P. Cardo |
AGeWa (Automatic Gene Walk) : an automatic tool for ASO design |
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C. Bannert, M. Rehmsmeier, R. Spang and J. Stoye |
Sequence Database Search Using Jumping Alignments |
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A. Barbasiewicz, L. Liu, B. F. Lang, N. Shimko and G. Burger |
Building Organelle Genome Databases using an Object-Oriented Approach |
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K. Behrendt, A. Politzer, J. Saez-Rodriguez, M. Reuss and K. Mauch |
Topological Analysis and Visualisation of large Signalling Networks: The TGF-beta Signal Transduction in Eukaryotic Systems |
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U. Bohnebeck and T. Wetjen |
Effective Pre- and Post-Processing for the Determination of Highly Sensitive Oligonucleotides to be Used on DNA Microarrays |
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R. Braeuning, P. Ernst, M. Falkenhahn, K.-H. Glatting, A. Hotz-Wagenblatt, M. van der Linden, B. Pardon, C. del Val and S. Suhai |
The German EMBnet Node: GENIUSnet |
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M. Brandl, M. S. Weiss, A. Jabs, J. Sühnel and R. Hilgenfeld |
C-H... Interactions in Proteins: A Structural Bioinformatics Study |
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A. Fleischmann, M. Darsow, K. Degtyarenko and R. Apweiler |
IntEnz - The Enzyme Database in Oracle |
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E. Fricke, S. Land, S. Rotert, D. Karas and E. Wingender |
Cytomer: A database on gene expression sources |
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R. R. Gabdoulline, A. Gonzalez and R. C. Wade |
3D modeling of macromolecular structures and reactions in the context of genomes |
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V. Gailus-Durner, R. Gohla and T. Crass |
A Question Based Navigator for Exercising Distributed Bioinformatics Tasks |
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Ä. Glass, L. Gierl |
Designing GENESYS - a software system for mining chip data |
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U. Goebel, S. Gebauer-Jung and T. Wiehe |
A Program for the Construction of a Promoter Model From a Set of Upstream Sequences of Coregulated Genes |
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E. Goessling, O. V. Kel-Margoulis, A. E. Kel and E. Wingender |
MATCHTM - a tool for searching transcription factor binding sites in DNA sequences. Application for the analysis of human chromosomes |
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S. Goetze, A. Knopp, C. Benham, S. A. Krawetz and J. Bode |
Biomathematical and in vitro analysis of destabilized regions in the interferon gene cluster |
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U. Götze, S. Pistor, C. Choi, M. Krull, F. Schacherer, N. Voss and
E. Wingender |
TRANSPATH - a database on signal transduction networks |
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Juergen Haas |
Flexible Web-Controlled Pipelining of Stand-Alone Windows Data Analysis Applications |
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K. Hafez and J.-G. Reich |
Modeling the Human Lipoprotein Metabolism using the Object Oriented Approach - Role of CETP |
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J.-T. Horng, C.-M. Lin, B.-H. Yang and C.-Y. Kao |
A Genetic Algorithm for Multiple Sequence Alignment |
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H.-D. Huang, S.-F. Fang and J.-T. Horng |
Mining Combinations of Structural Motif from SSU 16 S Ribosomal RNA Secondary Structures |
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J. Hüsing, M. Zeschnigk, T. Hölter and K.-H. Jöckel |
Using expression arrays to investigate deletion of chromosomal strands |
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H.-C. Hung, G.-Y. Liu, and G.-G. Chang |
Computer Data Fitting in the Equilibrium Protein Folding Process Involving Multiple Intermediates |
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J. Hurlebaus, W. Wiechert and R. Takors |
MMT - A Metabolic Modeling Tool for Metabolic Engineering |
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D. Husmeier and F. Wright |
Approximate Bayesian Discrimination between Alternative DNA Mosaic Structures |
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O. V. Kel-Margoulis, I. V. Deineko, I. Reuter, E. Wingender and A. E. Kel |
TRANSCompel® - a professional database on composite regulatory elements in eukaryotic genes |
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N. Khan and S. Rahman |
A Conceptual Object Model of Gene Mutation Data |
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J. T. Kim |
Modelling the Organization of Flower Morphogenesis by Transcription Factor Networks Using Lindenmayer Systems |
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J. T. Kim, T. Martinetz and D. Polani |
On the Effects of Transcription Factor Properties on the Information Content of Binding Sites |
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S. Klamt and E. D Gilles |
FluxAnalyzer: A Graphical User Interface for Analyzing Structural Properties and Fluxes in Balanced Metabolic Networks |
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D.-U. Kloos, C. Choi and E. Wingender |
The SMAD-TGF-ß Signalling Network: TRANSFAC meets TRANSPATH |
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A. Knopp, S. Goetze, C. Benham, M. Frisch, S. Krawetz and J. Bode |
Analysis of biomathematically predicted Scaffold / Matrix Attached Regions (S/MARs) by three different approaches |
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K. Koch, F. Zöllner and G. Sagerer |
Building a new Rotamer Library for Protein-Protein Docking using energy calculations and statistical approaches |
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M. Lange, A. Freier, U. Scholz and A. Stephanik |
A Computational Support for the Access to Integrated Molecular Biology Data
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W. Liebermeister |
Independent component analysis of gene expression data |
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I. Liebich, M. Christensen and E. Wingender |
ReAlSplice: A database on regulated alternative splicing |
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W. Liu, A. Woodward and D. Kell |
Compression of proteome gel images using complex wavelet transform |
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H. Michael, S. Thiele and E. Wingender |
TRANSFAC®_YEAST |
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S. Möller, M. Bantscheff, M. O. Glocker, D. Koczan, P. Lorenz and
H.-J. Thiesen |
Correlation of Gene Expression as Measured by Different Assays |
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F. Moldenhauer, I. Zevedei and S. Schuster |
Pathway Analysis of Metabolic Networks: New version of METATOOL and convenient classification of metabolites |
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A. Mueller and M. J .E. Sternberg |
Structural annotation of the human genome |
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Y. L. Orlov, V. P. Filippov, V. N. Potapov and N. A. Kolchanov |
Construction of stochastic context trees for genetical texts |
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Y. L. Orlov, E. E. Vityaev, O. V. Vishnevsky, A. S. Belenok,
B. K. Kovalerchuk, M. A. Pozdnyakov and N. A. Kolchanov |
Program "Gene Discovery" for Pattern Matching in Promoter Sequences
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J. Pleiss, C. Gentner, H. Scheib, T. Schulz and R. D. Schmid |
From sequence to function: a quantitative model of lipase enantioselectivity |
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A. Potapov, K. Seidel, M. Christensen, V. Drewes, F. Schacherer and
E. Wingender |
The integrated TRANSFAC system as a basis for modeling the architecture of gene regulatory networks |
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J. Reichert, K. Mehliss and J. Sühnel |
The IMB Jena Image Library of Biological Macromolecules - New Features |
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K. Runte, H. Hermjakob and R. Apweiler |
Towards a New Curation Environment for the TrEMBL Database
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C. Schneider, M. Brandl, M. Meyer and J. Sühnel |
Water-Mediated Uracil-Cytosine Base Pairs in RNA - A Computational Study |
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D. Schomburg, I. Schomburg, A. Chang, O. Hofmann, C. Ebeling and
F. Ehrentreich |
BRENDA a resource for Enzyme data and metabolic pathway information |
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M. Schwehm |
Fast Stochastic Simulation of Metabolic Networks |
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K. Seidl and E. Wingender |
- PheGe - a novel concept for in-silico analyses of genotype/phenotype relations |
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J. Sun, J. van den Heuvel, A.-P. Zeng |
Reconstruction of metabolic and regulatory networks of Klebsiella pneumoniae from genome data |
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T. Toepel, U. Scholz, U. Mischke, D. Scheible, R. Hofestaedt and F. Trefz |
RAMEDIS - Rare Metabolic Diseases Publishing Tool for Genotype-Phenotype Correlation |
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A. T. Vasconcelos, L. Gonzaga, R. C. de Souza, D. Q. Mendes, R. F. C. Paixão,
R. Kersanach, M. Oliveira, S. M. Martins and A. J. G. Simpson |
A Tool for Automatic Genome Annotation |
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M. Werber and B. Weisshaar |
TF-Workbench: a database-driven environment for the analysis of transcription factors |
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K. Wieligmann, L.F. Pineda De Castro and M. Zacharias |
Conformational preferences of SH2 domains in free and ligand-bound states studied by molecular dynamics simulations |
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L. U. Wingen, J. T. Kim, H. Saedler and K. Dekker |
ZIGIA-DB: A versatile database for handling complex functional genomic data of Arabidopsis thaliana |
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E. W. Wolski, C. Wierling, T. Kreitler, S. Kielbasa, U. Schneider, J. Gobom, H. Lehrach and H. Eickhoff |
Visualization and analysis of gene expression data using freeware and GPL-Software |
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L. C. Wu, J. - T. Horng and F.- M. Lin |
An Approach to Finding Short Tandem Repeats in Complete Genomes
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I. Zevedei-Oancea and S. Schuster |
Treatment of multifunctional enzymes in metabolic pathway analysis |